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Table 1 Cytotoxic T-lymphocyte epitopes identified within the nucleocapsid protein of SARS-CoV-2

From: Designing a multi-epitope universal vaccine for concurrent infections of SARS-CoV-2 and influenza viruses using an immunoinformatics approach

Sequences

Immunogenicity

Antigenicity

Toxicity

Position

MHC-I alleles bind (IC50< 200)

QRNAPRITF

Yes

Yes

No

9–17

HLA-C*07:01; HLA-B*15:02; HLA-C*06:02; HLA-C*12:03; HLA-C*03:03; HLA-C*14:02

SSPDDQIGY

Yes

Yes

No

78–87

HLA-C*12:03; HLA-C*07:01

LSPRWYFYY

Yes

Yes

No

104–112

HLA-C*12:03; HLA-A*29:02;

HLA-A*01:01

NPANNAAIV

Yes

Yes

No

150–158

HLA-C*12:03; HLA-C*03:03

GDAALALLL

Yes

Yes

No

215–223

HLA-C*03:03; HLA-B*15:02; HLA-C*12:03

GTDYKHWPQ

Yes

Yes

No

295–304

HLA-C*12:03; HLA-C*05:01

SRIGMEVTP

Yes

Yes

No

318–326

HLA-C*12:03; HLA-C*03:03; HLA-C*07:01

KKADETQAL

Yes

Yes

No

374–383

HLA-C*03:03; HLA-C*12:03; HLA-B*15:02; HLA-B*39:01